Introduction
The Cardiomics is a genome project that collects and analyzes cardiovascular disease patients.
Cardiomics is an independent sub-project of KGP (Korean Genome Project) and KGP is a subset of PGP.
Data availability
Publicly Available Data
For Data of differential methylation analysis
- 298 early-onset AMI patients vs 247 controls
- Data from the paper: Epigenetic_Modulation_of_Vascular_Smooth_Muscle_Cell_Phenotype_Swtiching_in_Early_Onset_Acute_Myocardial_Infarction
Data can be downloaded from the following link -> Data_AMI_Methylation_Differential_Methylation_Analysis_10_fold_Summary.xlsx
Request Data
The data of Cardiomics is under legal restriction since data contain potentially identifying or sensitive patient information.
Therefore, 1) raw sequencing data,2) individual genotype information, and 3) clinical trait data will be available upon request and after approval from the Korean Genomics Centers' review board in Ulsan National Institue of Science and Technology.
For Raw data and clinical information
Sequencing data (FASTQ), individual genotypes, and clinical data can be provided upon request and document screening.
To request the data, please contact Eun-Seok Shin (sesim1989@gmail.com), 'Yoonsung Kwon (ponyo1203@unist.ac.kr), Yeonsu Jeon (brain0106@gmail.com), Jong Bhak (jongbhak@genomics.org),' with a completed request form.
Download data request forms
Cardiomics Projects
265 Korean Early-onset acute MI patients polygenic risk score genome
Genome_wide_analyses_of_early_onset_acute_myocardial_infarction_identify_29_novel_loci_by_whole_genome_sequencing
Identification_and_validation_of_six_acute_myocardial_infarction_associated_variants_including_a_novel_prognostic_marker_for_cardiac_mortality
Epigenetic_Modulation_of_Vascular_Smooth_Muscle_Cell_Phenotype_Swtiching_in_Early_Onset_Acute_Myocardial_Infarction
Related Links
- Korea1K - Koreangenome.org
- Korean genome project: http://koreangenome.org/
- KoVariome: http://opengenome.net/
- KOREF: http://koreanreference.org/
- KOGIC: http://kogic.net/
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